fastq2bcl()
main()
mock_run_id()
parse_args()
run()
set_mask()
setup_logging()
parse_seqdesc_fields()
validate_fields()
get_file_handlers()
get_mask_from_files()
read_fastq_files()
read_first_record()
append_data_to_bcl()
encode_cluster_byte()
encode_loc_bytes()
generate_run_info_xml()
get_cycle_dir()
init_bcl_and_write_cluster_counts()
write_bcl_and_stats()
write_control()
write_cycle()
write_filter()
write_locs()
write_run_info_xml()
write_stat_file()